BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018H09SP1|AL427400
(973 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1784 1894 0.0
>3x_Contig1784
Length = 28126
Score = 1894 bits (955), Expect = 0.0
Identities = 961/964 (99%)
Strand = Plus / Plus
Query: 4 ccaaagttcagctagattattttgtagtggagtaccagtaagtagaagcctcctttcagt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1003 ccaaagttcagctagattattttgtagtggagtaccagtaagtagaagcctcctttcagt 1062
Query: 64 attgaaattcaaaagggcttgccaacgagttgatctgaaatttttaatattatgggcttc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1063 attgaaattcaaaagggcttgccaacgagttgatctgaaatttttaatattatgggcttc 1122
Query: 124 gtcaaggatcatatattgccattttttacgcttgaatgaatgttgatcatgaactaccaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1123 gtcaaggatcatatattgccattttttacgcttgaatgaatgttgatcatgaactaccaa 1182
Query: 184 ctgataagaagtaatgcaaacatgaaacgcatcaggtttgttccatcctttacgcttttc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1183 ctgataagaagtaatgcaaacatgaaacgcatcaggtttgttccatcctttacgcttttc 1242
Query: 244 ccgtctctgctggggggaaccgtagtatgtcaaaactttaaagccaggagcaaacctctt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1243 ccgtctctgctggggggaaccgtagtatgtcaaaactttaaagccaggagcaaacctctt 1302
Query: 304 gaattccatttcccagttcaaaagaacggaagttggcacaacaattaaatgaggacccca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1303 gaattccatttcccagttcaaaagaacggaagttggcacaacaattaaatgaggacccca 1362
Query: 364 attttctttctcacaggcgaggtacgctaaaagtgaaatagtttgaatagttttccctaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1363 attttctttctcacaggcgaggtacgctaaaagtgaaatagtttgaatagttttccctaa 1422
Query: 424 acccatctcatcagctaaaataccattggtcttattattgtacagcgatgctaaccaatt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1423 acccatctcatcagctaaaataccattggtcttattattgtacagcgatgctaaccaatt 1482
Query: 484 taaaccttgcttttgatatattcttagtgttccacgcaataaggaaggtactgnaacgtc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1483 taaaccttgcttttgatatattcttagtgttccacgcaataaggaaggtactggaacgtc 1542
Query: 544 cgatacagctaaagggtctgcagcagcgggtgaagtaacactttctgtagtttcagcttt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1543 cgatacagctaaagggtctgcagcagcgggtgaagtaacactttctgtagtttcagcttt 1602
Query: 604 ttcatcttttaattcattgtcagactttggtggagatggcaattcttccgtttttgaatt 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1603 ttcatcttttaattcattgtcagactttggtggagatggcaattcttccgtttttgaatt 1662
Query: 664 attctcggcgcctgaactatcgccatcaagtccgtcatcagagctactatctgcatcaaa 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1663 attctcggcgcctgaactatcgccatcaagtccgtcatcagagctactatctgcatcaaa 1722
Query: 724 gtttacatcagcctccacatcttcttcgttctcatcaatattaccaagaagagcagataa 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1723 gtttacatcagcctccacatcttcttcgttctcatcaatattaccaagaagagcagataa 1782
Query: 784 tcctggggtatcctcttgcgcagaagcatcagcatcctccgtttcactttcggacgagct 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1783 tcctggggtatcctcttgcgcagaagcatcagcatcctccgtttcactttcggacgagct 1842
Query: 844 caacgaatcttccatagaatctgaaacagaatcagatgcttcatcaaaaattgattcgtc 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1843 caacgaatcttccatagaatctgaaacagaatcagatgcttcatcaaaaattgattcgtc 1902
Query: 904 tgcagcactcttactagtttcattgccaaaawcattgattttattcaattgtgcgttttt 963
||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct: 1903 tgcagcactcttactagtttcattgccaaaatcattgattttattcaattgtgcgtattt 1962
Query: 964 ggac 967
||||
Sbjct: 1963 ggac 1966
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7771
Number of Sequences: 1807
Number of extensions: 7771
Number of successful extensions: 68
Number of sequences better than 1.0e-20: 1
length of query: 973
length of database: 10,358,551
effective HSP length: 16
effective length of query: 957
effective length of database: 10,329,639
effective search space: 9885464523
effective search space used: 9885464523
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)